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Plant Program
… improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … communities affect plant growth and productivity. These insights have the potential to inform strategies that … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …
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JGI Portals
… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … clade-specific orthology/paralogy relationships as well as insights into clade-specific novelties and expansions.  … …
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Natural Prodcast Episode 6: Marc Chevrette
You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … to go in the next couple years. And hopefully, some of the insights that we glean from that will be broadly applicable …
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Single Cell Research Group
… is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to …
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Offerings & Capabilities
Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science by generating data in three … through end-to-end automation, and further advancing sequence applications, single cell genomics, DNA synthesis, …
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Natural Prodcast Episode 19: Bill Fenical
Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of the real … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …
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Natural Prodcast Episode 14: Nigel Mouncey
… 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get … off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We …
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Natural Prodcast Episode 11: Marnix Medema
Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … might help it. And so maybe my being a communicator lends me to collect little stories and then share them at …
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Forest Fungi, Seagrass, and a New View of Symbiosis
Three stories of JGI-supported research, connected to nutrient … communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao Ma. And Karen Serrano and …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific community as a user facility … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on …
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Natural Prodcast Episode 20: Brian Bachmann
… in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … amenable to work with, or even strains. And I think then it lends more to microbiology. And the more we have, the more …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …
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