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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … by those generating data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for … this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), …
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Natural Prodcast Episode 15: Katherine Duncan
… then, chemistry-wise, they’re the stars, right? Chemical diversity, the sheer number of chemicals they produce, their … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … naturalprodcast.com . Special thanks, as always, to my co-host Alison Takemura. If you like Alison, you want to hear …
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Natural Prodcast Episode 8: Eric Schmidt
… together to make small peptides. Those are fun, because the host organism can use whatever amino acids it has access to, … the sponges talk to each other? ERIC:   He was looking at interactions between sponges and other organisms. So one of … with animal metabolism itself, and it’s really amazing what diversity there is in animals. I think, even despite the …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … energy and environmental challenges. Through innovative research in synthetic biology, the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters …
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Secondary Metabolites Program
… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and … program aims to tap into the largely unexplored biochemical diversity within secondary metabolites, expanding their …
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Environmental Genomics Group
… genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through … Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial … ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    …
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Virus-Host Interactions and Genetic Diversity of Antarctic Sea Ice Bacteriophages
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Natural Prodcast Episode 23: Aaron Puri
… the future. So, then we were using these probes to look at host pathogen interactions mostly with like enteric bacteria. And I really … And I really dove into microbial physiology and microbial genetics, and really away from chemistry and synthesizing … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Cultivating Symbiotic Antarctic Microbes
… play critical roles in environmental processes (related to interactions of soil-sediment environments, water and … lifestyles found in the Antarctic lakes and offers a genetically-tractable model system that could help … sizes and their cells were not observed to associate with host cells. In the  Proceedings of the National Academy of …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated … strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … computational tools, the program supports foundational research related to soil nutrient cycling and health, … plants and microbes, and understanding microbiome interactions. The  insights derived are crucial for …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… symbiont, for example, of an ant. So these are very stable interactions that have been evolving for 300 million years, … the producing organism and strong interactions and the host or even in tripartite systems. So, in those cases, it’s … So we had a series of criteria to say this is a bunch of genetic material that exists in one copy, and it is …
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