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… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics … discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 … you can just take a pill, right? But with a small molecule potentially, you can do that. And so we were really lucky. …

… as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to the  MassIVE repository . Not all products are available …

… Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, … energy solutions. Algae, too, offer a wealth of untapped potential, with their ability to capture carbon and produce …

… for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … products and bioenergy crop enhancement. The program aims to tap into the largely unexplored biochemical diversity within secondary metabolites, expanding their potential applications in the bioeconomy including biofuels, …

… user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying … plant growth and productivity. These insights have the potential to inform strategies that improve agricultural …

… with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the …

… the University of Utah– is looking at the natural product potential of microorganisms from Great Salt Lake, which is a … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … genome right now. But eventually, it will be– it could be a viral sequence. It could be a contig. It could be whatever …

… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained … 10 metagenome-assembled genomes (MAGs) representing new potential methanogenic, anaerobic methanotrophic and …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode 13 of … other compounds that are produced, and we don’t know what potentially other targets, if there are actually other …

… lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is understanding the … For further details, please reach out to the Group Lead …

… enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data … algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. Book a …