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… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

With collaborative user projects, the JGI’s Plant Program delves into … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … all connected. And you can color these nodes. For example, based on taxonomy, or based on class of biosynthetic …

Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic … listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …

The Community Science Program (CSP) provides the scientific community at large with … Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … more customized analysis, the JGI also participates in publication of results. See more details on our Review …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of … of cells and allow for substrates to be directed towards secondary metabolite synthesis. We are currently … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

The IMG group owns and maintains integral components of JGI’s production … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … with the ultimate objective of facilitating omics-based scientific investigations. Development and maintenance …

Below is a brief description of the process needed to prepare and … requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation Guidelines RNA … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

… … DAN: Hey, everybody. Welcome back for another episode of … to go. What’s the bigger– is there a bigger picture here towards this research? And what do you want to get out of … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual … PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …