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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … by those generating data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
Learn more
Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome … – I did my Ph.D. with Craig Townsend and worked on aflatoxin biosynthesis, aflatoxin being a secondary metabolite … with. So transformation, or manipulation of the DNA of genes and bacteria, occurred much faster earlier than they …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … work. And that it involves some of these crazy genes, some of these enormous genes that encode these very … Episode Transcript … In this episode, Alison and I talk to Marnix Medema, from …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … Phylogenetic diversity estimates show that the gap between cultivated … uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first … coelicolor versus Streptomyces lividans. They both have the genes. The genes are pretty much 100% identical. We don't … Episode Transcript …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint … got a great interview with Ben Shen, from the Scripps Research Institute in Jupiter Florida. This interview is … Episode Transcript … This is our conversation with Professor Ben Shen, from The … the toxic molecule straight to the cancer cells and the toxin can kill it. Teamwork!   If you’re somewhat …
Learn more
Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … After your proposal is approved, the Contracts Officer will …
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Natural Prodcast Episode 15: Katherine Duncan
… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to … I was imagining some massive contraption for amplifying genes. I wasn’t really sure what actinobacteria were. Dan … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and … to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … carbon cycling, biodegradation and biogeochemistry. This research helps translate their genomic potential into …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint … and actually get to the DNA sequence – sequences for the genes that code for the proteins that produce secondary … Episode Transcript … This the third episode of Natural Prodcast, and the third and final part of our Primer conversation, where we’ve introduced …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics … a major transition of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data … The research efforts of the group have concentrated in … Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological applications (e.g., …
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Natural Prodcast Episode 18: A CSP Primer
… DAN UDWARY: It’s been a while, but Natural Prodcast is back again for … RNA alongside. That really helps us to determine where genes start and end and really help improve our annotation. … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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