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… and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … A complete publication list available at Google Scholar. Dutkiewicz, Z. …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … The Metagenome Program focuses on the high-throughput sequencing of …

… capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … U.S. Culture Collection Network (USCCN) to nominate their strains for sequencing, as long as they have a scientific … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …

… Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … Genome to Enzymes and Pathways focuses on discovering and … engineering traditionally utilizes a stepwise approach for strain development, requiring cycles of construct design, …

… To meet these needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell … same time, the team is expanding current capabilities in strain engineering and functional assays and supporting new …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very … were in the news recently – TSRI has acquired the Pfizer strain collection. And so that’s a big collection of natural …

… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

… microbes including a bacterium called methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …

… accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information … could use to develop new products with their production strains. To improve the efficiency of strain engineering, …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … they’re obligate marine. There’s so far no species or no strains known that really grow in freshwater. But they’re … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … what we’re trying to do right now is develop the chassis strains that then we can port things into as well. DAN: Give …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … algae, examining both natural populations and engineered strains. This approach allows for the identification of key … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …