Search

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … PI and receive permission for their planned work.   … For sequencing or metabolomics projects: data are subject to a  …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … episodes. This IS the third part, so if this is the first episode you’re checking out, you probably want to go … and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … briefly when you were looking at these genomes for the first time getting excited about this. And so you find these … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

The JGI Project Management Office carries out a number of activities to facilitate … that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Prodcast. It’s been about a month now since we dropped our first six episodes, and now after gathering some feedback … started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help …