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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw … percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than …
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Metabolomics Program
Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, … mass spectrometry-based methods to analyze metabolites from a wide range of biological and environmental samples — …
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … tremendous advances in understanding how to harness the power of second metabolite biosynthesis to produce chemicals … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … communities affect plant growth and productivity. These insights have the potential to inform strategies that … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Natural Prodcast Episode 20: Brian Bachmann
… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … our interview this week is with Professor Brian Bachmann from Vanderbilt University’s Chemistry Department, where he … come, though, too when you start talking about going after single gene clusters. BRIAN BACHMANN: That’s right. JACKIE …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … maybe it’s a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about … many bacteria – and fungi and plants. And so that’s the power and the promise of, I guess, the current age of …
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Frequently Asked Questions: Project Management
Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … by Science Program.  … The majority of JGI projects come from the user community. Find out about JGI’s calls for … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … Proposals accepted before FY22 are transitioning away from producing use-restricted data. JGI proposals typically …
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Natural Prodcast Episode 15: Katherine Duncan
Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … just to make sure I understand, molecular networking is so powerful because you’re linking like with like. And so if … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 19: Bill Fenical
… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … I mean, people knew about plants’ chemistry ever since the isolation of morphine, 1870 or something like that. And so … nothing new.” OK, that’s pretty ominous. Because these were powerful people. These were people that really controlled …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … and delays on the work. The transfer of a proposal from one commercial institution to a new commercial …
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