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… at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great … genome mining software we mentioned: “ EvoMining reveals the origin and fate of natural product biosynthetic enzymes. ” And CORASON, for large-scale comparisons of biosynthetic gene clusters: “ A …

The Metagenome Program uses advanced sequencing technologies to … is to develop a deeper understanding of microbial community assembly and microbial interactions, including … interactions, over ecological and evolutionary time scales.The Metagenome Program combines large-scale, …

The Joint Genome Institute's DNA Synthesis Platform capabilities … This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and bioproduct … : a user science group dedicated to user project design, assembly, and quality control Strain Engineering Group : a …

… and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … Schulz et al. (2020) Advantages and limits of metagenomic assembly and binning of a giant virus. mSystems. 5 (3) …

And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … so they end up probably over time dispersing across the chromosome. So I think that’s my feeling.  And so it could … is what those would be. The work that we do at larger scale in order to look at the chemistry a little bit more …

… the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … produces high-quality de novo assemblies for very large-scale single genomes, based on the JGI assembly tool meraculous. It is now available for both …

… and rate and drive down the cost of producing riboflavin at scale.  DAN: Got it.  NIGEL MOUNCEY: And I did that for … technologies. Nowadays people are really looking at these assembly line pathways – polyketides – as ways to produce … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … has been fun because then we’ve been able to blow out the scale a little bit for the project. DAN: Do you see broader … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range … more customized analysis, the JGI also participates in publication of results. See more details on our Review …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … a class of natural product with a really cool chemical structure. We try to explain it, but it’s chemistry, so I … among many, many major discoveries since the genomic revolution, to me, as a natural part chemist for microbial …