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The Physcomitrella patens chromosome‐scale assembly reveals moss genome structure and evolution
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Products
… Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard … will be improved based on feasibility and scientific merit Assembly, annotation ( Mycocosm ) 256/404 Fungal …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … bright guy who’s been thinking for a long time about the evolution and natural products systems. This conversation … that you need to do these coordination bonds, then many structures will be able to work. So, for example, in that …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … interactions, over ecological and evolutionary time scales.The Metagenome Program combines large-scale, …
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Industry Engagement Program
… data flows and promote novel data applications. As a large-scale data generator, the JGI has a key role to play in providing high-quality, structured and curated data to support AI applications. In … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support … This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and bioproduct … : a user science group dedicated to user project design, assembly, and quality control Strain Engineering Group : a …
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Natural Prodcast Episode 16: Marcy Balunas
… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … so they end up probably over time dispersing across the chromosome. So I think that’s my feeling.  And so it could … is what those would be. The work that we do at larger scale in order to look at the chemistry a little bit more …
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Natural Prodcast Episode 14: Nigel Mouncey
… and rate and drive down the cost of producing riboflavin at scale.  DAN: Got it.  NIGEL MOUNCEY: And I did that for … technologies. Nowadays people are really looking at these assembly line pathways – polyketides – as ways to produce … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric … and other relevant organisms. We provide access to large-scale datasets and analysis tools for genomes, metagenomes, …
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Natural Prodcast Episode 23: Aaron Puri
… And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … “tail of the acyl homoserine lactone” can have different structures, and that is akin to what you’re referring to … has been fun because then we’ve been able to blow out the scale a little bit for the project. DAN: Do you see broader …
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Plant Program
… types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes advanced tools, including deep … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … Plant Flagship Genomes are selected through discussion with the JGI Plant …
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Mission
… facility, we provide advanced genomic capabilities, large-scale AI-ready data and professional expertise to support … The JGI contributes to this mission by enabling large-scale genomic discoveries, data integration, and AI-driven … information into actionable insights and solutions. Genome-enabled biology provides solutions to strengthen …
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