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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … novel methods to enable large-scale comparative analysis, mining and visualization of big data. …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy … be episode 11. This continues our little sprint on genome mining. In the last episode , Alison and I talked about the … But they’ve seen contributions from people all over the world who have made additions to antiSMASH, contributed …
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Natural Prodcast Episode 17: Cassandra Quave
… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast … as well just from being on Twitter. It’s this weird virtual world where I’m like, oh– DAN UDWARY: For sure, yeah. I told … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … about natural products you’ll get a good sense of what it’s like working with him.  We talk about his father, the … Episode Transcript … This is episode 5 of Natural Prodcast, our conversation with Brad Moore, a …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint … and his group to work on sequencing, synthesis and genome mining technology to help access complicated natural product … of listeners downloading this from countries all over the world – as many from outside the US as inside – and so, …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … While an ever-increasing number of phage and virus genomes have …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … The Fungal & Algal Program harnesses cutting-edge sequencing … and ecological diversity of fungi and algae, examining both natural populations and engineered strains. This …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy … in natural product reports on the evolution of genome mining and microbes with Mohammad Alanjary and Tilmann Weber … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of … early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural product … time now and almost ready for a real presentation to the world. … But, meanwhile, I’ve been sitting on all these …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. … to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us genome … the list. Some of them are natural sequences. Actually the vast majority are natural sequences, and we chose several of …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … clusters. And one can think about when we talk about genome mining in organisms a lot of times they’re genetically … Episode Transcript … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Our research focuses on the assembly of metagenomic sequence data …
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