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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for … strains. This approach allows for the identification of key functional traits that have direct applications in bioenergy … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and …
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Natural Prodcast Episode 19: Bill Fenical
… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … it took 15 to 18 years before we were able to convince the diversity of marine ecologists that they needed to consider … powerful people. These were people that really controlled microbial drug discovery. And a guy like me, with no …
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Secondary Metabolites Program
Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … program aims to tap into the largely unexplored biochemical diversity within secondary metabolites, expanding their …
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Natural Prodcast Episode 15: Katherine Duncan
… then, chemistry-wise, they’re the stars, right? Chemical diversity, the sheer number of chemicals they produce, their … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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New Lineages of Life Group
… novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature …
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Microbiome Data Science Team
… of host-virus interactions, the exploration of the functional dark matter as well as the development of novel … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help … the JGI to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end …
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Natural Prodcast Episode 16: Marcy Balunas
… postdoc Panama as part of the international cooperative biodiversity group (ICBG) based in Panama and was dual there … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Brad Moore, UC San Diego and Scripps Institution of Oceanography. (Courtesy of B. Moore) DAN: This is the second … in the marine environment. And it was that year that the Pacific Northwest had experienced the largest bloom ever …
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Plant Program
… development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … and protein folding models, to improve the accuracy of functional predictions and speed up genome analysis. … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is usually an individual in a central office, such as President, Rector, CEO, Sponsored …
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