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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … tell us what’s active, which peak is active before we even scale up. The reason that we did that was to fit what we … active in a heterologous host. So what you really need is a large tool kit of pieces in order to put them together to …
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Community Science Program
… Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range …
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Natural Prodcast Episode 9: Roger Linington
… sophisticated tools, because now we had a very reasonably large set of articles which had been manually curated for … trade with the collaborators. So, we used those initial analyses we’d done by hand, in order to build a machine … is likely to be in the environment? Can we use this broad-scale view of the chemistry in order to start to make …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … evolutionary time scales.The Metagenome Program combines large-scale, time-series metagenomic data with detailed …
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Industry Engagement Program
… institutions — with capabilities that had remained largely unknown and underutilized by industry. When Director … joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … data flows and promote novel data applications. As a large-scale data generator, the JGI has a key role to play in …
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Natural Prodcast Episode 18: A CSP Primer
… .” This is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE … a new investigator who wants to try out something smaller scale, or if you’re just curious to know more, then I really … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Natural Prodcast Episode 14: Nigel Mouncey
… and rate and drive down the cost of producing riboflavin at scale.  DAN: Got it.  NIGEL MOUNCEY: And I did that for … worked for the best part of 20 years on products that were largely in commercialization, I thought it’d be great to … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … and other relevant organisms. We provide access to large-scale datasets and analysis tools for genomes, …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … bioeconomy applications. The program provides high-quality, large-scale genomic data to advance microbial research that drives … particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in their natural …
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Natural Prodcast Episode 16: Marcy Balunas
… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … assays is what those would be. The work that we do at larger scale in order to look at the chemistry a little bit more … Natural Prodcast presents our interview with Professor Marcy Balunas , currently at the University of …
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Analyze Data
… The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with our partners to build infrastructure in support of new analysis techniques.  Notice Data Portal files will … Chief Informatics Officer …
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