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… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … et al. (2016) A Rickettsiales symbiont of amoebae with ancient features. Environmental Microbiology. 18 (8), …

The central mission of the JGI’s Genomic Technologies department is   ensuring users have … capabilities and functional genomics, scaling capacity through end-to-end automation, and further advancing …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of mobile genetic elements with geNomad. Nat … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … more customized analysis, the JGI also participates in publication of results. See more details on our Review …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … existing technology. And a lot of that was around chemical identification technology, mass spec, NMR. And we talked a …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data … to confidently assign species to nearly 326 genomes. Through the analysis of cliques, it has also become possible …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Metagenome Stable Isotope Probing (SIP) Used for the identification of active groups of organisms within a … based on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum … Cummings DA Jr. Methylotroph Quorum Sensing Signal Identification by Inverse Stable Isotopic Labeling . ACS …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … to my submission, they were saying that natural product identification– biosynthetic gene cluster identification was … least a few thousand gene clusters in a view and it still remains readable. And you can really quickly find …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … form and are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …