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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Reach the next generation of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has:  11 CSU … of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Natural Prodcast Episode 11: Marnix Medema
… that genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the … and he arranged funding to do it nonetheless from his own group’s funds. So I could start that project, and I was … There is no precise definition, like where to draw the boundaries. But in principle, a gene cluster family would be …
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Publications
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI …
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Natural Prodcast Episode 7: Ben Shen
… schedule for a while. Moving forward, I’m hoping to get a new one out every two weeks. This time, we’ve got a great … that JGI recently started collaborating with Ben and his group to work on sequencing, synthesis and genome mining … the compound is so toxic, and the mechanism, which is breaking DNA, so there’s no selectivity. So, people have …
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Microbiome Data Science Team
… and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major transition … of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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DNA Synthesis Program
Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA Synthesis … desired chemicals. … The JGI's DNA Synthesis Science Group supports researchers exploring how to convert sequence …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… along the journey. And so I started my PhD in Brad Moore’s group and joined his lab when he was at University of … the border like “nothing to see here”. We were the first Breaking Bad, I guess. But no, you trained me in how to … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Natural Prodcast Episode 19: Bill Fenical
… this an awfully long time ago, and she’s been in her new job for a long time now, but I guess you all might not … that he came from Europe, and went to the University of Hawaii, and immediately started thinking about marine toxins and … We found that there were new genera, these basic taxonomic group called the genus. We found there were new genera in …
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Natural Prodcast Episode 4: Nancy Keller
… example of probing fungi for natural products and finding new things. And so, really happy to have you here. And … you know, just from a data standpoint, just figuring out introns and dealing with, you know, weirdness in the … bacteria, of course, are much smaller. But I think a lot of groups are sequencing fungi. Just going and sequencing them. …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities … cycling and bioproduct applications.  The team has three subgroups: Synthetic Biology Lab : a user science group … Group : a research & development group and focused on new technologies and optimizing tools — including strain …
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