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The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … with the Project Management Office to help ensure the JGI’s genomic capabilities are ready and applicable to users.  … …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … PI and receive permission for their planned work.   … For sequencing or metabolomics projects: data are subject to a  …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the 40,000 from bacteria, there’s …

… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … into the secondary metabolism of some more novel marine bacteria. You know, I first met Bill as a postdoc working … in the process. We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready …

… knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … article adds to the compendium generated as part of Genomic Encyclopedia of Bacteria and Archaea (GEBA) initiative. … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional … energy and environmental mission objectives. Fungi, algae, bacteria, archaea, viruses, and microbial communities of …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … of Sample QC Sample Quality and Contamination JGI’s Genomic DNA Sample QC Protocol JGI’s Total RNA Sample QC …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … colleagues. Aaron is doing some cool stuff with cool bacteria that I’m fascinated to learn more about. He works … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …