Search

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … and to understand their evolution. It was a fun, wide-ranging conversation, where we talked about our shared …

… workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … sequenced at the JGI. IMG/M is also open to scientists worldwide for the annotation, analysis, and distribution of their …

… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … … The Mycocosm portal supports the annotation, comparative analysis, and distribution of fungal genome datasets. It … and publicly available datasets encompassing a wide array of fungal genomes, along with curated metadata to …

… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five … has led a vision for the JGI that sees secondary metabolism analysis and research as a driver for novel technologies …

… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … spectrometry-based methods to analyze metabolites from a wide range of biological and environmental samples — … a combination of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … really complex bioactive natural product molecules. It’s a wide ranging conversation, and we could have gone on for a … of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put some of these …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and algae. …

Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … tool. It’s the best thing that we have. And its rule-based analysis is second to none. And it’s the most valuable thing …