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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … The Metagenome Program focuses on the high-throughput sequencing of …
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Strain Engineering
… The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no … a taxonomically diverse suite of microbial chassis strains for elevated opportunity for expression. Research Team    …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is … user project design, assembly, and quality control Strain Engineering Group : a research & development group and …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … University of Tübingen. This continues our short series of genome mining, the science of examining DNA sequence to try …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s … getting really excited about January, we’re having our new crop of partner instructors come into Wisconsin so we can … Prodcast, our conversation with Marc Chevrette, a postdoctoral researcher from the laboratory of Jo Handelsman at the …
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Viral Genomics Group
… and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, … microbiome processes is still limited. One key challenge is to complement diversity surveys ( Who is there? ) with …
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New Lineages of Life Group
… data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find novel functions that may impact microbiome structure …
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Secondary Metabolites Program
… algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … can unlock new avenues for bio-based products and bioenergy crop enhancement. The program aims to tap into the largely …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … a glass fermenter, but is the fermenter also known as our gut? And can you be able to re engineer the gut microbiota … contact us on Twitter at @JGI or @danudwary , or by email to [email protected] . We’d love to get your feedback! …
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Special Initiatives & Programs
… sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis requests, the … request falls below these thresholds, you will need to utilize a core facility instead. Proposals may not exceed …
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Genome to gut: crop engineering for human microbiomes
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Natural Prodcast Episode 16: Marcy Balunas
… in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …
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