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Microbial Program
… applications. The program provides high-quality, large-scale genomic data to advance microbial research that drives … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly …
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IMG Group
… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … the deployment of computational workflows at peta- and exa- scales on multicore and many core architectures with the … of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates …
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Single Cell Research Group
… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … R., Rubin E.M., Hugenholtz P. & Woyke T . Insights into the phylogeny and coding potential of microbial dark matter. … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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JGI Portals
… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across …
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Viral Genomics Group
… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Genome-scale phylogeny and comparative genomics of the fungal order Sordariales
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Community Science Program
Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate … PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana Glavina … DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …
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Natural Prodcast Episode 12: Nadine Ziemert
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … whole idea of NaPDoS , this computer program which uses phylogeny to predict compounds. And so I really had to dig … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …
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Natural Prodcast Episode 14: Nigel Mouncey
… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … and rate and drive down the cost of producing riboflavin at scale.  DAN: Got it.  NIGEL MOUNCEY: And I did that for … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics …
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