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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … It’s a lot on two component systems. And did some sigma factor work and anti-sigma factors. in my past life.  DAN: … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … about natural products and the science and scientists of secondary metabolism. Hey there, and welcome back to … and BiG-SLiCE, and now the BiG-FAM database of biosynthetic gene cluster families. And he tells us about forthcoming …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … is a natural product person, but the other half is a pathogenesis person, where I work with pathogens and always … come to realize over these decades is that they are fitness factors for the fungus. So it’s really difficult to …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy …
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Plant Program
… as well as insights into clade-specific novelties and expansions.  … Brachypodium distachyon is an annual grass … accessions) and protocols (transformation, crossing, mutagenesis) are available to the community.   … EcoFABs link … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … Protocol media number 2, ISP2, and dilute it by a factor of 100. And we got– we would find– we found organisms … chemical synthesis and make analogs in combination of mutagenesis and direct evolution. Yeah. DAN UDWARY: So it’s …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific … feasibility and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … technology to help access complicated natural product gene clusters, and we’re all really excited about that, and … that can be applied to help the discovery of other classes of natural product. DAN: That’s right. Yeah. Yeah, …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … that we can correlate environmental signals back to active transcription. There’s always been a big mystery in the …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … oftentimes will bind to receptors within biosynthetic gene clusters. Specifically, these are Tet repressors that … bind them and then allow for their release from the DNA and transcription of biosynthetic gene clusters? DAN: And I …
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