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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … of all publicly available genomes from three domains of life, in a uniquely integrated context.  … The MycoCosm web … fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential to drive innovations in … of all publicly available genomes from three domains of life, in a uniquely integrated context.  … The IMG/VR system …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with metabolomics … mass spectrometry-based methods to analyze metabolites from a wide range of biological and environmental samples — …
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Natural Prodcast Episode 17: Cassandra Quave
So I was always an outdoorsy kid – I was often found in a tree or covered in dirt playing with my dog in the yard. But … could be used to treat these highly resistant bacterial and fungal pathogens. And we’ve actually just wrapped up a year, … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … at some topic that I’m working with about now. I made a tree of different compounds, and I’d looked at it from an … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … where this happened have a tendency to be susceptible to a fungal infection of rye grain – a specific fungus, Claviceps … But where taxol comes from is, from the bark of the yew tree, is where it was originally discovered. And so that …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … colors. I mean, where else in nature– and they’re not fungal. Where else nature can you go see colonies of … And I said, well, it’s possible to do this. And life has figured out how to do this. So I started to look …
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The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies.
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … some sigma factor work and anti-sigma factors. in my past life.  DAN: Yeah, I didn’t really appreciate that that’s … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … Novel approaches are being explored to predict microbial lifestyles using AI-driven analysis of such datasets. The … of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal lineages to improve …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the …     Our homepage video includes external footage from:  University of Delaware Laura.Selbmann©PNRA. All the … development. Develop an understanding of microbial and fungal metabolism necessary to design communities, new …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … taxol, for example. If you say isolate compound from the trees – if you’re cutting the trees, it takes years to … natural products of microbial origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the …
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