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JGI Mission As a U.S. Department of Energy Office of Science user … Institute provides advanced genomic capabilities, large-scale data and professional expertise to support the global … be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, in the journal Nature . Following …

… … DAN: Hello, everyone, and Welcome back for Episode 14 of … and rate and drive down the cost of producing riboflavin at scale.  DAN: Got it.  NIGEL MOUNCEY: And I did that for … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… and environmental sustainability. … Plant Flagship Genomes are selected through discussion with the JGI Plant … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … produces high-quality de novo assemblies for very large-scale single genomes, based on the JGI assembly tool …

Research in the Woyke laboratory focuses on the utility of … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

…   DAN: Got it.    NANCY: And this is really to complete the genomes, and I’m really thankful for this. It sort of goes … contigs. And so most fungi… Oh, the fungi vary in number of chromosomes. Like, ironically, yeast, which has a small … has eight chromosomes. It goes by genera. Neurospora has four chromosomes. So if you have one of these fungi, can you …

… yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and … mean, I am– yeah. I just got the position like three years, four years– four years ago I think. Yeah. Yeah, Paul Jensen. … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve … function.   To jointly support these missions, and to expand upon highly successful past collaborations, the DOE … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … then we would take our two foot core. And so that’s only four feet in. And there is quite a bit of sun and exposure … so they end up probably over time dispersing across the chromosome. So I think that’s my feeling.  And so it could …

Our data platforms are a key resource for the broader scientific … of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … as well as insights into clade-specific novelties and expansions.  … The SMC provides complete sequence and …

… has been fun because then we’ve been able to blow out the scale a little bit for the project. DAN: Do you see broader … out the quorum sensing signals very quickly. So there’s four carbons that are derived from methionine, you run two … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… … DAN: You’re listening to the US Department of Energy Joint … them utilize the enediyne as a payload molecule. The other four also utilize two different natural products. So a … well. One is to do DNA sequencing. So upon sequencing many genomes, now we don’t have to, as in the past, go randomly …