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… DAN: You’re listening to the US. .Department of Energy Joint Genome … and metabolomics, to ask these questions. DAN: How far along do you feel like we are in terms of completing the … Episode Transcript … This is Episode 6 of Natural Prodcast, our conversation with Marc Chevrette, a …

… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …

… DAN: Hello, everyone, and Welcome back for Episode 14 of … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five … Episode Transcript … is Dr. Nigel Mouncey , JGI’s Director, and also lead of the JGI’s Secondary Metabolites Science Program . Since …

… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … Episode Transcript …

… The Joint Genome Institute and the Molecular Foundry have launched … for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … synthesis. The Secondary Metabolites Program offers users extensive genomics, biodesign and metabolomics capabilities …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …

… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… DAN UDWARY: You’re listening to the Department of Energy … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … Episode Transcript … is our interview with Nadine Ziemert, from the University of Tübingen. This continues our short series of genome …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … is granted to proposal PIs, Co-PIs, and collaborators of any given proposal. Third parties (often referred to as … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … discuss available options. Note: In 2021, we conducted an extensive internal product audit to analyze the scientific …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which …