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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental … gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … AI-ready data and professional expertise to support the global research community in studies of complex biological … and manufacturing. Genomic science lies at the heart of biology, providing the foundational knowledge to …
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … in RNA without a DNA stage. “I would argue RNA viruses globally are even less known than DNA viruses,” said Simon … have been associated with eukaryotes. Along with the expansion of bacteria-associated RNA viruses is the finding …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … challenges in the sourcing, recovery, and utilization of critical minerals and materials. The proposal submission … Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. …
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Plant Program
… delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … pathways, and that really helped me to get an idea how diverse the secondary metabolites are, even if primary … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … a pipet again except for, of course, some cases when journalists come when they want to see you handle a pipet for … grad student with Michael. And we did it together. Did the global analysis of biosynthetic gene clusters across, well, …
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