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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … breakthrough discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … research provides insights into microbial diversity and metabolic potential, with implications for energy production, … The Metagenome Program focuses on the high-throughput sequencing of …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Strain Engineering
… The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously … expression and functional exploration.  The developed strains represent an additional phase of user-accessible …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … with AntiSMASH , which is available for analysis of your genomes on the web , or you can download a docker container …
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Natural Prodcast Episode 12: Nadine Ziemert
… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted at …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of … innovative research in synthetic biology, the program enables the design and synthesis of complex genetic pathways …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring … To meet these needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell … same time, the team is expanding current capabilities in strain engineering and functional assays and supporting new …
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