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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae … solutions, fostering a bioeconomy powered by nature’s resources. … The Fungal & Algal Program harnesses cutting-edge sequencing … and environmental sustainability. Fungi, with million species, are essential for ecosystem functioning — …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and … The Metagenome Program focuses on the high-throughput sequencing of …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the … Review the list of open calls ; click on the call link to … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science … to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … researchers had to apply to each facility with separate review schedules and selection processes, making it …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … 1) Review JGI sample QC requirements and protocols Obtaining … 1) Complete Sample Metadata form Sample metadata is collected via … any materials classified above NIH Biosafety Level 2. 3) Review Shipping Instructions After receiving shipping …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and … for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … Access to the Molecular Foundry and use of JGI capabilities …
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Natural Prodcast Episode 7: Ben Shen
… all really excited about that, and I think that comes across in the interview. If you listened to the Primer … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very … Fleming – the discovery of penicillin from the fungal species – probably told us that fungi could be very …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … the JGI at any time using a simple web-based form and are reviewed annually. For accepted proposals, sequencing, … All proposals will be externally peer-reviewed for …
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and … analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … The Microbial Program focuses on using advanced sequencing technologies …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated … is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …
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