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… support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing … group and focused on new technologies and optimizing tools — including strain engineering — to make them more … enables users to validate hypotheses generated from mining genomic data by designing and assembling physical DNA …

… and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data … and follow the metadata requirements for integrating data into IMG/M (see IMG/M submission site ). The Integrated … of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … Other projects in the group include the sequencing and comparative analysis of thousands of archaeal and bacterial … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

Genome Insider is a podcast that showcases the work of JGI … world. Learn about JGI-supported projects, delving into the researchers’ motivations, the insights that amaze them, and how their work contributes to …

… a good catalog of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put … an undergraduate and not succeeding and still using all the tools from mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …

I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … I have the feeling that once we have the synthetic biology tools, we finally are in a position to exploit secondary … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … natural product – they also often surprise us by giving us insights, inspires us to discover the fundamentals and then … so everybody, readers of the library, can come to our databases and look for the specific information they are …

… program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional … and contributing this information freely to the public databases. In 2004, the JGI established itself as a national … scientific discovery. Projects focused on organisms for comparative purposes, on model systems for microbe-microbe …

… means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … using these together along with all of our computational tools to really build out much more of an integrative … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … more into the meta genome mining. We started to build the tools for natural product researchers that easily can … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …