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… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … episode is our conversation with Nancy Keller, a fantastic fungal natural products researcher from the University of … Nobody’s found it in any other microbes. There are linear polyketides that fungi make and that bacteria make, but this …

The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …

… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE Metrics There … the shelter-in-place. ††† Actual Operation = 69 days due to reduced lab activities related to the return-to-work plan in …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … product molecules and sort of the intersection between biochemistry and synthetic chemistry. And I did postdoctoral … to him about.  ALISON: Cool! Ocean microbes!  DAN: Yeah, absolutely. And then after that I was a professor at the …

… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … bit about the data release policy? TANJA WOYKE: Yeah, absolutely. So we do have a new, or I’m going to call it …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… of it. So it wasn’t only chemistry or only biochemistry or genetics. It was also ecology. It was also … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … see if you can see patterns and if you can actually make predictions. And then you get excited if you can make …

… actually work? Because again, I was getting training in biochemistry, and organic chemistry, and all of these … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … iterations of preparative LC until you get down to your bio-guided targets. We’ve been able to work our way back up from …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … such that you can really put a confidence value into your prediction. Otherwise it would have been like a very broad … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … folding models, to improve the accuracy of functional predictions and speed up genome analysis. Additionally, the … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … In particular during an era of ‘homology creep’, function prediction as purely based on annotation may not be … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …