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The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … (ANI) and fraction of orthologous genomic regions (Alignment fraction, AF) have been computed for nearly 28,000 …

… notified as projects reach specific milestones, either by automated emails or emails from your Project Manager. Your … of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … use-restricted data. JGI proposals typically include multiple projects of different types which can span several …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … NJ,  et al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … sometimes you can be out of luck right or it could be a whole grad student thesis to synthesize a 13C-labeled … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing …

… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … or phenotype of interest, prior to and in conjunction with whole genome sequencing. … Jean-Marie Volland: Assistant … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … challenges, such as improving soil health, carbon sequestration and bioeconomy applications. The program provides … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …

… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … 10,000, 15,000, 20,000 mutants a week. We started doing a whole bunch of strain engineering efforts. We did a lot of … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … natural product versions of enediyne molecules, there’s a whole bunch of other atoms that can either stabilize the …

Below is a brief description of the process needed to prepare and ship samples for … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … manager for alternate solutions. … The PI will receive an automated email once the samples are received and checked …

… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …