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Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … which highlights our skewed understanding of microbial metabolism towards a minority of cultivated bacteria, still … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … organisms? What’s its name? And what kind of secondary metabolism has it got? AARON PURI: Yeah. OK. So I think that … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of … like JGI.  DAN: No, yeah, for sure. I mean, I can look at a biosynthetic cluster and sort of figure out what’s going on. …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … the bioeconomy. Gain a genome-level understanding of plant metabolism, physiology, and growth to develop new bioenergy … … Microbes constitute the largest reservoir of biodiversity and functional versatility on Earth. Their …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … JGI produces to try to find and identify natural product biosynthetic gene clusters and to do research to get a …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural Prodcast, … which is using DNA sequence to identify and interpret biosynthetic, secondary metabolism pathways. And today, we …

… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … transfer. And so it’s beneficial then to have secondary metabolism in proximity within the genome so that things can …

… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … Department, where he is the PI of the Laboratory for Biosynthetic Studies. Brian and I are old friends and … also dying to talk in more detail about the JGI Secondary Metabolism Collaboratory , which is the big huge monster …

… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … She talks to lots of great scientists outside of secondary metabolism, and if you like what we’re doing here, you’ll …

… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … aims to encourage innovative research exploiting a diversity of capabilities. Previously, researchers had to … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

The IMG group owns and maintains integral components of JGI’s production workflow, … at peta- and exa- scales on multicore and many core architectures with the ultimate objective of facilitating …

… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … all of these programs can and often do involve secondary metabolism. JGI’s mission is broadly focused on biological … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …