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When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

… in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … flowing– water flows into them and floods them on a regular basis. So they are full of terrestrial microbes. So they’re …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists …

… improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … is providing essential tools for exploring the molecular basis of complex biological systems, driving innovations in …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … The team works hand in hand with the Project Management Office to help ensure the JGI’s genomic capabilities are …