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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
Learn more
Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of … Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Natural Prodcast Episode 7: Ben Shen
… time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in Jupiter Florida. This interview … understand how nature is making compounds, but we are also applying CRISPR technology, anything as genome editing, … why the stereochemistry was that way. And he told me, it’s enzymes. It’s magic.  BEN:  Yeah, right.  DAN: I thought …
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Natural Prodcast Episode 15: Katherine Duncan
… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I … to talk to her about a whole list of things. So we have a Scripps background shared together, although I don’t think we … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 19: Bill Fenical
… Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of the real … legends of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a … 20S proteasome. The proteasome in the cell is a bundle of enzymes that is used to degrade proteins, peptides, that are …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural … some of these enormous genes that encode these very large enzymes. And I was like, OK, wow, these are really cool. And … using machine learning models, that very tiny precursor peptide, encoding genes that encode the very small precursor …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … one interesting thing is though, you might have the same backbone gene synthases, but having a different decoration … I wish we could predict. I wish we could look at these enzymes and predict, and really place it to structure. …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, … data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … collaboration with U.S. and international scientists to drive innovations that align with DOE's missions. …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I … close enough to energy inputs. So this is– for us, that’s dripping water, percolating through the soil through leaf … what led me to natural products. So after realizing that enzymes were specific for their substrates, that you …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review … successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, …
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Natural Prodcast Episode 16: Marcy Balunas
… group (ICBG) based in Panama and was dual there and at Scripps where I first met Dan. I think you were almost … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … it interacting with, like, a binding pocket for one of the enzymes, so something that’s metal dependent? Is it– and we …
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