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… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and … assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … the need to have a limited and time-sensitive protection of certain types of data to support their use by those generating data. The … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… Below is a brief description of the process needed to prepare and ship samples for … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … samples to the JGI. PI sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need …

… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … and make sure that what the algorithm had done was actually accurate. And so we told people that if they would curate … are a little bit more difficult to handle. The number of variables is quite high. Mass spectrometry, in particular, …

… Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics … You can visit the Products & Offerings section of our website for more details, including a downloadable … The majority of JGI projects come from the user community. Find out about …

… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … depending on how strict they get in terms of contig length and all those kinds of things because metagenomes can …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and inter-organismal … microorganisms, by sequencing large populations of bacteria and archaea in their natural environments using …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … The research efforts of the group have concentrated in demonstrating the power of …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … of their synthases so that we can start to use the DNA sequence to predict or just understand better the … biosynthesis. And so yeah, you basically have your chain length and then some sort of substituent at the third carbon …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … And then we’re building phylogenies a lot, making phylogenetic trees, and then trying to see if the trees make …

… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical capabilities … could have arisen from. DAN UDWARY: OK, so sort of a phylogenetic reconstruction kind of a thing. ALISON NARAYAN: …