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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy … know what they’re looking at, and hard to do on a large scale. And so– Marnix Medema: But in the end, I do feel that … pathway even if the genes are scrambled or altered in the chromosome. And so it becomes very difficult then to compare …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support … This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and bioproduct … Check out our organism-agnostic CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by …
Learn more
Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of … and rate and drive down the cost of producing riboflavin at scale.  DAN: Got it.  NIGEL MOUNCEY: And I did that for … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
Learn more
Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  … analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … The research efforts of the group have concentrated in demonstrating …
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … so they end up probably over time dispersing across the chromosome. So I think that’s my feeling.  And so it could …
Learn more
Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … has been fun because then we’ve been able to blow out the scale a little bit for the project. DAN: Do you see broader …
Learn more
Community Science Program
… The Community Science Program (CSP) provides the scientific community at large with … Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a … research proposals  here that integrate genomics with nanoscale science, accelerating discoveries and developing … Access to the Molecular Foundry and use of JGI capabilities … with Dr. Blaby-Haas to model, predict, and understand nanoscale processes responsible for the selectivity, handling, …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
Learn more
Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the … to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … species and plant-microbe interactions, advancing efforts to create renewable energy sources and bolster …
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