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… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … Exploring the fascinating world of giant viruses, which challenge our …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … Embargo : A period in which data is not publicly available in … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… DAN: Hello, everyone, and Welcome back for Episode 14 of … really functional genomics. And there’s a lot of sequencing based approaches, of course, now that we can use to figure … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… DAN: You’re listening to the US Department of Energy Joint … then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in … to really challenge me, and as being sort of a laboratory based scientist, to get out onto the ocean and do ocean …

… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual … PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE … = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† …

… DAN UDWARY: You’re listening to the Department of Energy … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… Dan Udwary: You’re listening to the Department of Energy … all connected. And you can color these nodes. For example, based on taxonomy, or based on class of biosynthetic … pathway even if the genes are scrambled or altered in the chromosome. And so it becomes very difficult then to compare …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … 1) Complete Sample Metadata form Sample metadata is collected via …

… The Community Science Program (CSP) provides the scientific community at large with … synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … this program, the DOE aims to advance genome science-based scientific research from a broad range of disciplines. …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … Download plant, algal, fungal and microbial genomes and …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … see things that maybe aren’t real, and so it’s thought that based on historical records and weather recordings of the … Episode Transcript … This is the first episode of Natural Prodcast, a podcast produced by the US Department of …