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… profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …

… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … Nature . The mushroom has a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. … Laccaria bicolor has a symbiotic relationship with poplar …

… Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … will be episode 11. This continues our little sprint on genome mining. In the last episode , Alison and I talked about the basics of genome mining, which is using DNA sequence to identify and …

… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … boss is Nigel Mouncey, and he’s the director of the Joint Genome Institute. And so anybody who’s listened to other … an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But it …

… Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact … library types and quality of finished product depend on genome. Selected genomes will be improved based on …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial eukaryotes, build …

… in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … around drug discovery, which includes screening methods, genome mining in cave microbiomes, and using engineered … was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really happened yet. It was …

… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular …

… discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … Conservative taxonomy and quality assessment of giant virus genomes with GVClass. ”  npj Viruses, Volume 2 Article 60. … tool for phylogenetic distance matrix analysis and genome grouping …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … the University of Tübingen in Germany. Like me, she’s a genome miner and has been involved with the AntiSMASH and … her review in natural product reports on the evolution of genome mining and microbes with Mohammad Alanjary and …