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… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … kept looking for open jobs that said, we want a chemist to study the ocean. And I didn’t find a single job … are many others, including Streptomycetes, which are common soil bacteria. DAN UDWARY: Yeah, we talk about them a lot …

… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the … An assay used for profiling transcription factor binding sites across entire genomes. This …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … is a chemical compound called geosmin that’s produced by soil bacteria that live all over the place. So that smell of … I’m definitely seeing why this is such an important area to study. Okay, what’s your third story?  DAN: The third story …

… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … internal analytical standards to accurately measure environmental microbiome activity levels.This functional assay …

… it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … or online catalog, I guess. So we've also been able to get soils from Purdue campus itself and been able to actually …

… what was this bacterium, and why did your group want to study it? Marnix Medema: You mean the PhD project that I … primer episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is … the action of the microbiome because if you sterilize the soil, the protective effect is gone. You can transplant the …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic …

… in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to help train the … Jonathan’s email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the …

… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … And for the audience, ethnobotany is the scientific study of the ways that people interact with plants, whether … and culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or …

… Trubl, a virologist and postdoc at Lawrence Livermore National Laboratory, is using bioinformatics and isotopes to track how viruses influence the flow of carbon in permafrost.  …

… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … for antibiotics and the microbes that make them is in the soil. There’s … uh… there’s an issue there though, in that …

… in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and deliverables as well as target cycle …