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Microbiome Data Science Team
… Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of …
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Natural Prodcast Episode 7: Ben Shen
… or…? BEN: Yeah. So, if I want to put it into perspective, right, so the enediyne structure – the enediyne … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain … product. So we are able to enrich the pipeline, for big pharmas like Pfizer will be able to really now take them into …
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Natural Prodcast Episode 14: Nigel Mouncey
… never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … a baseline process. And then really dig deeper into both aspects of the strain, as well as the fermentation process … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 12: Nadine Ziemert
… she’s a genome miner and has been involved with the AntiSMASH and MIBiG projects. And I found her review in natural … Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 1: The Primer, Part 1
… in the what? 15th, 16th century.  ALISON: Yeah, I lived in Massachusetts for a while. DAN: There you go. So you’ve … of see it. DAN: So what we’ve got here is, I just grabbed a photo of a “biochemical pathways” chart. So if you spend any … the basics in this field. This, along with parts 2 and 3, should be a great place to start if you don’t know much …
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Natural Prodcast Episode 5: Brad Moore
… and I did that. And looking at all those art history photos of the, you know, various old buildings in in Rome … they do something, and then they come home. The kid’s perspective. And you don’t see what happens behind that period … natural products in the desert? Brad: Yeah… there was a master plan. And Tucson was a magical place for me as a …
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Industry Engagement Program
… computer analysis coupled with liquid chromatography mass spectrometry. We offer accessible, AI-ready large-scale data …
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Environmental Genomics Group
… incorporation of isotopes from labeled nutrients into biomass. When paired with metagenomics, qSIP can decipher … genomes and other genomic elements (Vyshenska et al. 2023). … Mendota. Sci Data 11 , 966 (2024). https://doi.org/10.1038/s41597-024-03826-8 Nayfach, S., Roux, S., Seshadri, R. et …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… and materials. The proposal submission deadline is March 31, 2026 .  … (CMMs). Click for a list of CMMs and the results of the 2023 DOE Critical Materials Assessment . While we expect most … increments.  At the JGI, a typical proposal is active for 3 years with the possibility for extension. Fungal genomes, …
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Natural Prodcast Episode 23: Aaron Puri
… like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix [Medema] — was out … and is again, maybe highlighting the people-centric aspects of the broader field and just going from one question … and an unusual acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… metabolism. Hey everybody, this is Dan with episode 13 of National Prodcast. This continues our little section on … or subdisciplines, started to grow and have different perspectives– from the chemists on one side, microbiologists, … knowns, and to move a little bit away from that to try to unmask chemical dark matter. And the idea behind this is that, …
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Single Cell Research Group
… through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood G. T., Teh … A. L., Eloe-Fadrosh E. A., Pavlopoulos G. A., Hadjithomas M., Varghese N. J., Paez-Espino D., Hungate project, … A., Meier-Kolthoff J. P., Goker M., Coates R. C., Hadjithomas M., Pavlopoulos G. A., Paez-Espino D., Yoshikuni Y., …
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