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RegPrecise 3.0 – A resource for genome-scale exploration of transcriptional regulation in bacteria
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Natural Prodcast Episode 13: Francisco Barona Goméz
… are very stable interactions that have been evolving for 300 million years, that could be a reasonable number if you … of years in these particular niches, produce probably 20 or 30 more metabolites, which have this particular feature of … particular pathway. So all these BGCs encode between 80-90% of all known genes. Or genes that you can put a name …
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Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24T)
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MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters.
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Improved Draft Genome Sequence of Microbacterium sp. Strain LKL04, a Bacterial Endophyte Associated with Switchgrass Plants
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Natural Prodcast Episode 6: Marc Chevrette
… by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … have no extra genes hanging around, they still dedicate 20-30% of their genome to secondary metabolism. So it’s very … that’s really popped up at funding agencies and the popular news recently because a lot of soldiers in the Iraq and …
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Natural Prodcast Episode 17: Cassandra Quave
… wasn’t an MRSA strain at the time because that was in the 1980s. I’m showing my age now. So early 1980s we didn’t have– there were some isolated cases but it … plants and bringing them back is not your jam, the good news is there’s this amazing resource that can be provided …
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High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland
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Natural Prodcast Episode 3: The Primer, Part 3
… biology got more sophisticated around the 80s and the 90s. And so we started to be able to explore DNA sequencing … your cultures, but then you’re going to find another 20 or 30 secondary metabolism pathways that you didn’t even know …
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A Plant Root Atlas for Tracking Developmental Trajectories
… by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially called out as … Single-Cell Data Viewer Tool on Phytozome Biosciences News:  Plant Single-Cell Solutions for Energy and the Environment Workshop Report Biosciences News:  Plant Single-cell Solutions for Energy and the …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… relative of SOD is P. infestans , responsible for the mid-19th century Irish potato famine.   Shortly before the … All told, the disease has accounted for upwards of $30 billion in losses , including the death of tens of … 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. Genetics. Genomes highlight …
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Natural Prodcast Episode 20: Brian Bachmann
… anybody in natural product discovery in any field and even 30 years ago would say it’s the [key to] success. And that … at Scripps, I guess, 22 years ago. And it’s over 130 steps to make everninomicin. DAN UDWARY: Yeah, one of … https://sim.confex.com/sim/np2023/meetingapp.cgi/Paper/46926 Jen Wurm:  … https://sim.confex.com/sim/np2023/meetingapp.cgi/Paper/46925 …
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