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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … University, was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. Genetics. Genomes highlight …
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Natural Prodcast Episode 4: Nancy Keller
… we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … do you check if they’re there? Like we always talk about 16S for bacteria, but we don’t talk about it so easily with … you look at the ITS region. That’s equivalent to the 16S. However, we did have a talk by Mark Stadler today who …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect … improving sustainable soil management practices. … In June 2020, the Department of Energy announced the  2020 TCF …
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Natural Prodcast Episode 19: Bill Fenical
… seems hard to believe in retrospect. BILL FENICAL: Well, in 2021, absolutely hard to believe. But when you go way back, … with the National Cancer Institute who had a panel of 60 different cancer cell lines. And we would send them these … using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with everything that’s known. So …
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Examples: Successful LOIs & Submissions
… communities … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional … Genomics Submission … FICUS Example #1 … FICUS Example #2 …
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Secondary Metabolites Program
… of cell-free based expression platforms: Only 10-20% of BGCs are expressed under standard laboratory …
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Tanja Woyke Elected to American Academy of Microbiology
American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 nominees. The selection process for … the AAM Fellows in this cohort. Go here for the full AAM news release. Woyke is also one of the organizers for the …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the … development and its applications. “I moved to UC Davis in 2014,” recalled Philipp Zerbe of the University of …
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Extracting the Secrets of Secondary Metabolites
… in overcoming this obstacle when it hit the scene in 2019. Now, that power is poised to grow exponentially by … pairing proved to rapidly confirm enhanced production of 22 metabolites from six biosynthetic gene clusters. One of … Science User Facility, is supported under contract DE-AC02- 05CH11231. …
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You Can Move, But You Can’t Hide
Scientific Computing Center (NERSC) (https://ror.org/05v3mvq14), are DOE Office of Science User Facilities operated under Contract No. DE-AC02-05CH11231. This work also received support from the … to L.A.N.L., DE-AC05-00OR22725 to O.R.N.L., DEAC05-76RL01830 to P.N.N.L.), and used computational resources from …
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When “The Blob” Made It Hotter Under the Water
… such as hurricanes and droughts. Another one began in late 2013, when a large patch of warm ocean water about a third … go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than 270 water … of the U.S. Department of Energy under Contract DE-AC02- 05CH11231, the G. Unger Vetlesen and Ambrose Monell …
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Microbiome Data Science Team
… the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new … from the human gut microbiome. Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and …
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