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Natural Prodcast Episode 11: Marnix Medema
… to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on … is really happening, if people are really going to sequence 10 or 20 genomes at once then we really need to have …
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Natural Prodcast Episode 18: A CSP Primer
We don’t want to get a proposal that’s just asking for 20 microbial genomes. That is not a good fit for our annual … proposals as well. I’ve been at the JGI for 20 years, and 10 of those years, I’ve been a project manager. MENAKA … amount that they can request. So the minimum request is 100 kb. The maximum request is 500 kb. DAN UDWARY: For DNA …
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Natural Prodcast Episode 5: Brad Moore
Natural Products conference, which took place last January 2020 in San Diego. San Diego, of course, is the “home turf” … pairs. It was not linear, like Streptomyces , but circular. 10% of the genome encoded natural product pathways. Dan: … Brad: Yeah, at that time, that was new, right? Like, my god 10% of the genome makes small molecules that have, you know, …
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10 From JGI on the 2019 Highly Cited Researchers List
… the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly … team established community gardens of switchgrass plants in 10 different field sites on a north-south gradient across …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) … Goal FY 2025 Total 700.0     8,585     Q1 2025 175 190.304 109% 2,164 2,136 98.7% Q2 2025 175 152.100 87% 2,117 2,112 …
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Natural Prodcast Episode 3: The Primer, Part 3
… the number was. But I want to say it was like less than 10. Since, you know, a recent decade.  DAN: I’m sure that’s … me to check her stat and she was absolutely correct. Since 2010 there have been eight new antibiotics added to the …
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CSP New Investigator Call
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Complete Genome Sequence of the Aerobic Marine Methanotroph Methylomonas methanica MC09
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Natural Prodcast Episode 13: Francisco Barona Goméz
… of this is based on a really great paper that came out in 2020 where this is all explained in detail, so if you’d like … a bit embarrassed that we recorded this conversation about 10 months ago. I was pretty green at the time and had some … to my daughters– what did they think would be important in 100 years. Would natural products be important for …
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Natural Prodcast Episode 16: Marcy Balunas
… so there are– I hesitate to make a guess but maybe 50 to 100 different strains and they are in individual tubules.  … in the field, these glacial bacteria grow slow and it’s not 100% clear that we know what their biological activities … call this the needle in the Haystack. Because if we have 10,000 features which one do we look at because we are a …
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Genomes OnLine Database (GOLD) v.10: new features and updates
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Sharing Structure and Function in Biological Design with SBOL 2.0
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