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The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research …

… and the bacteria and how the chemistry is going back and forth between them is part of what fascinates me about what … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … garden ant as well as the American honeybee. And so I have multiple opinions which I’m never short of but. In terms of …

I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … in and around drug discovery, which includes screening methods, genome mining in cave microbiomes, and using … the metabolome into well plates. And we can use our fancy multiplexed activity metabolomics method to tell us what’s …

… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … see. So it doesn’t seem to be a correlation between biodiversity in taxa and biodiversity in secondary metabolites. … the batch effect. Because they use different extraction methods and stuff like that. So we have a lot of data out …

… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … antiSMASH has been sort of a good aggregator of different methods that people use when they’re doing homology … amino acid out of solution and stick another amino acid or multiple other amino acids onto it to create a small …

… exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome … The program employs advanced mass spectrometry-based methods to analyze metabolites from a wide range of …

… genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … encoded by them. Well, they had come out over actually multiple decades of time. But still to be able to use those … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will …

… analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … functional dark matter as well as the development of novel methods to enable large-scale comparative analysis, mining … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …

Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … ACADEMIC, NON-PROFIT or COMMERCIAL PROPOSALS with MULTIPLE COLLABORATORS: The submitting researcher’s home …

Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … on a team at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept … Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And …

… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of … by Bristol Myers Squibb. And it is now in phase III in multiple sites, phase III human clinical trials. ALISON … looking at samples and revising all the media and revising methods. We didn’t spend a lot of time on this because …