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Natural Prodcast Episode 13: Francisco Barona Goméz
… Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … So the conservation depends on the genomic lineage you are looking at. So that’s why the term “central,” or “primary,” … and we can really start testing and organizing things beyond artificial names. ALISON TAKEMURA: Just because I …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You guys have put together a fantastic program. So I’m looking forward to the next couple of days. Yeah, yeah. So … say, five or six decades, the merger of many pharmaceutical companies. So we got it from Pfizer, but Pfizer is the most … But [for] the discovery process, it is really small biotech companies, or, like academic labs, and they are …
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Natural Prodcast Episode 15: Katherine Duncan
… I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … what’s important in terms of the chemistry produced by microbes. And by what’s important, I mean, like, where … since starting my own group is these tools, in terms of looking at the chemistry produced by microbes, they’re …
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Fungal & Algal Program
… vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … into practical applications, including sustainable biofuels, biomaterials, natural products, and environmental … The program’s focus is on large-scale sequencing efforts that survey the vast phylogenetic and ecological …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect … metagenomics and metatranscriptomics provide invaluable information on virus diversity and activity in microbial … resources. The main focus of these resource development efforts currently include:  in silico host prediction for …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… proposal call . This represents a unique opportunity for researchers to request the capabilities and expertise of … science, accelerating discoveries and developing transformative bio-based technologies that address challenges in the sourcing, … by the Foundry. If a user’s project requires consumables beyond what is customary, they will establish a charge …
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities through working … A-LIFT pre-college programs, the JGI has collaborated with Biotech Partners to host students transitioning from high … University of California, Merced … Biotech Partners …
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Metagenome Program
… advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, … diversity and metabolic potential, with implications for energy production, environmental sustainability, and …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … you get a new organism or a genome, let's say, and you're looking at clusters, is there something that kind of … fun that we've started that is a different subject is from microbes to medicine labs. So this is-- we've been working …
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Natural Prodcast Episode 1: The Primer, Part 1
… Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … Island for a couple of years before I left that to join a biotech startup. And after that came to work with the JGI. … now. Maybe you want to describe that.  ALISON: Okay. We’re looking at a schematic of different pathways in a microbial …
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Natural Prodcast Episode 11: Marnix Medema
… genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … things. But before that, I wanted to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- … a nice example of going from a whole community with many microbes, hundreds of gene clusters, and then being able to …
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DOE Metrics
…     2,208     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE … 28 33.63 8400 8760 * Reflects actual data due to analysis beyond fiscal year-end close. …
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