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Natural Prodcast Episode 15: Katherine Duncan
I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … what’s important in terms of the chemistry produced by microbes. And by what’s important, I mean, like, where … since starting my own group is these tools, in terms of looking at the chemistry produced by microbes, they’re …
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Fungal & Algal Program
… vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … into practical applications, including sustainable biofuels, biomaterials, natural products, and environmental … The program’s focus is on large-scale sequencing efforts that survey the vast phylogenetic and ecological …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … you get a new organism or a genome, let's say, and you're looking at clusters, is there something that kind of … fun that we've started that is a different subject is from microbes to medicine labs. So this is-- we've been working …
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Mission
… and resources. Our vision is to lead genomic innovation for a sustainable bioeconomy. ALL PROPOSALS must support the … National Laboratory and the HudsonAlpha Institute for Biotechnology . We are located in the Integrative Genomics … Science Program, characterize organisms (plants and microbes) relevant to the DOE science mission areas of …
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Metagenome Program
… advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, … diversity and metabolic potential, with implications for energy production, environmental sustainability, and …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in advancing … the Berkeley Lab K-12 program, the JGI collaborates with Biotech Partners to host students transitioning from high … of California, Merced … Alabama A&M University … CalTeach … Biotech Partners … Learn more about internship programs we …
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Natural Prodcast Episode 1: The Primer, Part 1
Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … Island for a couple of years before I left that to join a biotech startup. And after that came to work with the JGI. … now. Maybe you want to describe that.  ALISON: Okay. We’re looking at a schematic of different pathways in a microbial …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … first exposure, my junior year as an undergrad. And to me, looking at the chemistry of the molecules and then looking … we can put together. What makes it a little bit different beyond that– and sorry, I’m just going to keep babbling …
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Natural Prodcast Episode 11: Marnix Medema
… genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … things. But before that, I wanted to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- … a nice example of going from a whole community with many microbes, hundreds of gene clusters, and then being able to …
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DOE Metrics
…     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE … 28 33.63 8400 8760 * Reflects actual data due to analysis beyond fiscal year-end close. …
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Natural Prodcast Episode 4: Nancy Keller
… to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting some conversations … use natural products necessarily. Fungi are large. They’re microbes, but they’re large microbes. And they have all … tissues, different structures, different spores. I like looking at that I’m a very visual person. So, when we make …
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Micro-Scale Applications Group
… of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI … activity levels.This functional assay lets us move beyond cataloging the genes of microorganisms and start … sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling strategies that allow us to …
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