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Natural Prodcast Episode 5: Brad Moore
… working with him.  We talk about his father, the legendary marine natural products chemist, Richard Moore, and get into … Institution of Oceanography. And Brad and I, Alison, have known each other for quite a while because Brad was my … with before. And perhaps in some cases where there’s very little even genomic information there, as well. So I think …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the … work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds upon thousands of …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … to the first episode of Natural Prodcast. First, maybe, a little bit of background. My name is Dan Udwary. I – as well … go look that up and I couldn’t find the answer, so it’s not known as far as I could tell.  ALISON: It could be bacterial …
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Natural Prodcast Episode 9: Roger Linington
… natural products chemistry is one. DAN: So, I’ve always known Roger as an expert in natural product structure … of Health. DAN:  All right, why don’t you tell us a little bit about that. ROGER:  Yeah, this was an amazing … natural products. And so that sort of really captured my attention. And so I worked for Ray Andersen there, and had a …
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Sequencing Technologies
Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … The team works hand in hand with the Project Management Office to help ensure the JGI’s genomic capabilities are …
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Natural Prodcast Episode 20: Brian Bachmann
… lab way back in the day. And then you did a postdoc for a little bit there and then went off to industry. BRIAN … has to have a story. And it can be looking for drugs from marine organisms, in which case you get to go to exotic … And I worked as an undergraduate for a pretty well-known guy, infamous person, actually. His name is Tomas …
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Natural Prodcast Episode 22: Alison Narayan
… some way, shape, or form. And so do you want to tell us a little bit about what got you into natural products and got … origin stories. ALISON NARAYAN: For me, the initial attraction to natural products was dual, the beauty of the … any association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but … just not enough time and money. I mean, we have a huge marine fungal project in collaboration with Bill Fenical at … off of antibiotics, then you really haven’t been paying attention. And so we’ve tried to build SMC to be a …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …
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Natural Prodcast Episode 16: Marcy Balunas
… morphed along the way.  And so I ended up actually taking a little bit of time off between my undergrad and my masters, … and so we were able to actually not dive to collect the marine tunicates, which was nice because it’s also cold. And … always. But often proteobacteria. We find chemistry that’s known, or sometimes novel, but often known, and yet the …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… to go from here? JACKIE: Well, how about you just give us a little bit of your background because you do-- you're … product dioxin ubiquinone, which actually comes from a marine bacterium. And so, I was working on chemically … now we really want to explore some of the ones that are unknown. And so we've done the sequence similallity network …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …
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