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Natural Prodcast Episode 9: Roger Linington
… nature has to offer us. I found this conversation really inspiring, and I’m super happy to be able bring it to you. … has gone on, the more we’ve become interested in sort of systems level approaches. So rather than asking one question … of evolving trajectory. I think, you know, most scientific careers are like that, in that they they follow an arc. And …
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Natural Prodcast Episode 17: Cassandra Quave
… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … born with a lot of different birth defects of my skeletal system. So I was missing bones and I had to have a lot of … those of you in the audience that really want to get your hands on more natural products, but perhaps the idea of …
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Game On: High School Students Drive Everglades Metagenomics Study
… in it because she credits her high school teacher with inspiring her to get into science and wanted to pay it … (metabolizing) methane within the Florida Everglades ecosystem. There are no roads or real human traffic through this … students were able to do professional-level research with hands-on experience for soil collection, processing, and DNA …
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Metabolomics Program
… to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our … metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and … of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial …
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Who We Are
… of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National … collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, … coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research … of metagenomic assembly and binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil …
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Data Ecosystem
… will be the development of tools and infrastructure for microbiome data science, and the development of new … specifically optimized for high-performance computing environments. … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that go …
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Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – … the science, technology, engineering, and mathematics (STEM) workforce. In doing so, it is our ambition to further …
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Natural Prodcast Episode 4: Nancy Keller
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … were associated with getting good transformation systems going. That has a lot to do with, well, the fact that … they deserve. They are so exciting. I get frustrated. Like microbiomes  – you know how that’s a big deal now. You go to …
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Natural Prodcast Episode 11: Marnix Medema
… about natural products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural … time]. And they had this project about this kind of weird system. And then they wanted so to look at secondary … we, for example, are really interested in metagenomes and microbiomes and figuring out which gene clusters are …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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