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… access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced … data exchange. … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the …

… such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and metabolomics data, shedding light on microbial … microbial clades. We leverage  genome-resolved metagenomics and targeted gene searches to expand representation …

… single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates …

… marine organisms. Except during the time that we worked in fungi. But what do you see as the overall theme of your … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let … organisms, including sponges, tunicates, cone snails, fungi, and bacteria. In recent years, Eric has been …

… which, at least at the time, was called Inatreq . It’s a fungicide that is active against Sartoria which is a really … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … , like metabolomics , like some of the more directed genomics approaches, DAPseq and the stabilized isotope …

… experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as …

… are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … barcode-based genetics (RB-TnSeq), and computational genomics to better understand the plant-associated … is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can be found in a myriad of …

… that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe … natural chemical compounds that you find in plants, fungi and bacteria, basically all living things. When your … at Scripps Institution of Oceanography. He got me into genomics of microbes, specifically of some that lived in the …

I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …

So it was great to hear her passion and enthusiasm for fungi. And we talk a lot about some of the technical … your talk today. It was another great example of probing fungi for natural products and finding new things. And so, … very interested in toxins – phytotoxins – produced by fungi. But the key seminar that tied everything back to the …