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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved … Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial … Ladau, J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. …
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DNA Synthesis Program
Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters … & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … Inventory of Composable …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. So, a team of scientists made an ambitious plan …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as … PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated … in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? … Microbial …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … is that you could, therefore, expect a lot of chemical diversity. So many compounds will fulfill the same function. … So we had a series of criteria to say this is a bunch of genetic material that exists in one copy, and it is …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such … still persists to date. Research Team    … Phylogenetic diversity estimates show that the gap between cultivated and …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …
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Partners
The JGI leverages its existing partnerships and develops others providing … DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … you to, say, go to your grandma’s backyard. To collect the diversity that exists in the 1940s? The answer is no! If … But today, you have so many other say morphological, genetic, you know say sugar, lipid composition – so I think …
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Natural Prodcast Episode 15: Katherine Duncan
Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … then, chemistry-wise, they’re the stars, right? Chemical diversity, the sheer number of chemicals they produce, their … part to the molecule that are similar, and there’s some bits that are different. And sometimes, in terms of …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … on large-scale sequencing efforts that survey the vast phylogenetic and ecological diversity of fungi and algae, …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … analytical standards to accurately measure environmental microbiome activity levels.This functional assay lets us …
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