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Natural Prodcast Episode 21: Elizabeth Parkinson
… can we utilize sequences of these TetRs to identify what molecule might bind them and then allow for their … so that's a new JGI project. Just came out from a CSP this year. BETSY PARKINSON: Yes. DAN: So how long do you expect … Understanding of Natural Product Induction Betsy's lab webpage and the page on the From Microbes to Medicines outreach …
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the …
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Natural Prodcast Episode 15: Katherine Duncan
It was actually when I was traveling at the end of first year University. Quite a lot of people in Europe do this … like. I was imagining some massive contraption for amplifying genes. I wasn’t really sure what actinobacteria were. … for Marine Science. And then I started my own group in 2016. And it very much ties in all of those experiences, you …
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Frequently Asked Questions: Project Management
… access JGI tools and systems. … Go to the “ edit contacts ” page in your account. Use the form to update all information … Fungi: Mycocosm (citation: https://doi.org/10.1093/nar/gkt1183 ) Algae: Phycocosm (citation: … are released to the public via JGI portals and the NCBI a year after generation.  Read More about our policies. … …
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Natural Prodcast Episode 9: Roger Linington
Microbiology conference that took place in January this year in San Diego, and that city is where I first met Roger, … microbial natural products in an ordered way for perhaps 80 years. And in that time, we have discovered many … published literature for the past hundred years and identify every article which describes the discovery of a …
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Viral Genomics Group
… standing virus-host interactions. ISME J.   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as … archaea across Earth’s biomes. Nature Microbiology. 4 , 1895–1906 Roux, S. et al. (2019) Minimum Information about an … (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et al. (2016) Ecogenomics and potential biogeochemical impacts of …
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Environmental Genomics Group
… on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated … for stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE … 10.1016/j.tim.2019.03.003 Eloe-Fadrosh, Emiley A. et al. (2016)  Metagenomics uncovers gaps in amplicon-based …
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Single Cell Research Group
Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial … host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood … Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., Schulz F. The trajectory of …
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Natural Prodcast Episode 7: Ben Shen
… as a new type of medicine that will open up a new year for targeted anti cancer drug discovery. DAN: Yeah, … collection we have here – all of them were collected before 2016, before that true enforcement of the Nagoya protocol. … if you are a microbiologist in the 40s, how do you classify a strain? You look at it and this is the 40s – you don’t …
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Natural Prodcast Episode 5: Brad Moore
… advisor.  Brad: Oh my goodness. Those were good years, Dan!  Dan: For too many years. Brad: And now look, … cool because the work has gone so much more than just identifying genes to that toxin, but it’s opened up this whole … underwater vehicles. Brad: You did not! Alison: I did, like 2016, I think. Yes, it was just so funny to hear how they’re …
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Natural Prodcast Episode 8: Eric Schmidt
… metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our conversation … the amazing John Faulkner’s work, who passed away about 17 years ago now. It looked really interesting. He was … for the last 10 years in this area. ALISON:  Just a clarifying question, like small molecule versus peptide. It’s the …
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Natural Prodcast Episode 17: Cassandra Quave
… has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend that … And so a path opened itself to me, just before my senior year of college, a chance to go to the Amazon and work with … they were starting to show the ability to really identify, and get crystal structures out of these mixed powders, …
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