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… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … and/or hosts. To that end, the JGI Viral Genomics group is exploring different approaches including laboratory …

… and a tool for predicting natural product structures from genomes. And I was writing grants furiously to try to get … a number of years earlier as one of the first Streptomyces genomes that had just not  been released yet. And there was … rumors of people sequencing like these enormous numbers of genomes, like 20 genomes, which was just incredible at that …

… works to uncover these hidden biochemical resources by exploring the genetic pathways responsible for their … towards secondary metabolite synthesis. We are currently exploring  Escherichia coli and  Streptomyces lysate … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

… Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … metagenome sequence, in the context of reference isolate genomes included from the IMG/M system. …

… it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature … in this case EvoMining, we might be able to find any new genomes, new areas or regions or loci, that encode for new, …

… Otani with his postdoc, Sylvia Kunakom. And so we are exploring a whole different set in a whole range of …

… So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … that we needed to ask whether they would do the full genomes for us. So fortunately, the secondary metabolite … be some real surprises. I mean, they’re probably smaller genomes. They’re gram-negative bacteria. But we want to see …

… profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …