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Single Cell Research Group
K. T., Eloe-Fadrosh E. A., Kyrpides N. C., Woyke T . Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Brad Moore, UC San Diego and Scripps Institution of Oceanography. (Courtesy of B. Moore) DAN: This is the second … at naturalprodcast.com Special thanks, as always, to my co-host, Alison Takemura. <woohoo> If you like Alison, and want …
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Natural Prodcast Episode 22: Alison Narayan
Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … project to explore the chemical capabilities of flavin monooxygenases, and more broadly about the field of biocatalysis …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect industry to JGI resources, as … Lab Intellectual Property Office to facilitate these new interactions.  The PDT enables industry engagement through …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial … that infect them. But what trends govern those virus-host interactions? Do generalist viruses run rampant, capable of …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome … So a lot of my work is as focused on insects As a host, and a little bit of my newer work is focused on … angry with one another, and trying to unpack all of those interactions. You know, that’s what gets me excited. That’s …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … these microbes. A better understanding of virus-host interactions opens the possibility of using phages to …
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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … algae and plants. These compounds are key to organisms' interactions with their environments and with each other, … under standard laboratory conditions by their native hosts. We are developing cell-free based systems to express …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … of background. My name is Dan Udwary. I – as well as my co-host, Alison Takemura, whose voice you’ll hear in a minute – … studied microbial ecology. I studied Vibrio species in the ocean, so heterotrophic bacteria. Now, we didn’t get into …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create renewable energy … Plant Program is advancing research into plant-microbiome interactions, focusing on how environmental stress and …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it … impacts on the global nutrient cycles regulated by their hosts. For example, microbes that capture and store carbon … and how the outcomes of these infections can affect the interactions within their ecosystems. Summary Microbes drive …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … of these viruses and associate them with their microbial hosts. However, assembling viral genomes from metagenomes is …
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