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… science. DOE JGI Project Managers collaborate with users to develop project requirements, define the scope of … Manager will facilitate project execution by: Verifying metadata and coordinating with IMG , GOLD and others for data annotation and submission Tracking, monitoring and …

… their synthesis. The Secondary Metabolites Program offers users extensive genomics, biodesign and metabolomics … support users, our efforts include developing computational tools for predicting biosynthetic gene clusters (BGCs), … cell- and cell free-based expression platforms, tools and data for deciphering regulatory networks, and refining …

… of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP … that integrate the expertise and capabilities of multiple user facilities Investigators with DOE mission-relevant … and must use a variety of capabilities at two or more user facilities. Proposals must be preceded by Letters of …

… eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, … to extract insights from large-scale biological datasets: Our group develops and applies artificial … learning approaches to analyze large-scale biological datasets. This work helps uncover patterns and relationships …

… Program combines large-scale, time-series metagenomic data with detailed characterization of model systems to … evolution. The Program focuses on developing computational tools and visualization resources that support user analysis of biogeochemically-relevant pathways, …

… The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. … and pathways vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose …

… interactions occurring in microbiomes, these omics data must be complemented with single-cell resolution assays … to the development and maintenance of a number of viromics tools and resources. The main focus of these resource … phage proteins user-friendly integrated pipelines (MVP) and databases (IMG/VR) for viromics analyses …

… One of the JGI’s key assets is our user community, comprising a broad range of researchers and … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data life cycle, and … Looking for BBTools? Find it here.  …

… fungal and algal pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to … across the fungal tree of life or its major branches for users to characterize and propagate annotations across … sampling of fungi, laboratory analysis and genomics data exploration. …

… or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … we’re now very much – we’re interested in how we can build tools which will let us see the whole landscape of natural … and new developments in mass spectrometry hardware, software, new developments in NMR methods, ultra fast …

… Software engineers in the Synthetic Biology Informatics … CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, … and Golden Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic …

… The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable … The program aims to generate high-quality genomic datasets, particularly for uncultivated microorganisms, by … microbial lifestyles using AI-driven analysis of such datasets. The program also collaborates with isolate …